IEEE/ACM Transactions on Computational Biology and Bioinformatics
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) is a bimonthly journal that publishes archival research results related to the algorithmic, mathematical, statistical, and computational methods that are central in bioinformatics and computational biology. Read the full scope of TCBB
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From the January/February 2019 Issue
Early Diagnosis of Alzheimer’s Disease Based on Resting-State Brain Networks and Deep Learning
By Ronghui Ju, Chenhui Hu, Pan Zhou, and Quanzheng Li
Computerized healthcare has undergone rapid development thanks to the advances in medical imaging and machine learning technologies. Especially, recent progress on deep learning opens a new era for multimedia based clinical decision support. In this paper, we use deep learning with brain network and clinical relevant text information to make early diagnosis of Alzheimer’s Disease (AD). The clinical relevant text information includes age, gender, and ApoE gene of the subject. The brain network is constructed by computing the functional connectivity of brain regions using resting-state functional magnetic resonance imaging (R-fMRI) data. A targeted autoencoder network is built to distinguish normal aging from mild cognitive impairment, an early stage of AD. The proposed method reveals discriminative brain network features effectively and provides a reliable classifier for AD detection. Compared to traditional classifiers based on R-fMRI time series data, about 31.21 percent improvement of the prediction accuracy is achieved by the proposed deep learning method, and the standard deviation reduces by 51.23 percent in the best case that means our prediction model is more stable and reliable compared to the traditional methods. Our work excavates deep learning’s advantages of classifying high-dimensional multimedia data in medical services, and could help predict and prevent AD at an early stage.
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Editorials and Announcements
Announcements
- We are pleased to announce that Aidong Zhang, the SUNY Distinguished Professor in the Department of Computer Science and Engineering at the University at Buffalo, The State University of New York, has been named the new Editor-in-Chief of the IEEE/ACM Transactions on Computational Biology and Bioinformatics starting in 2017.
- TCBB now offers authors access to Code Ocean. Code Ocean is a cloud-based executable research platform that allows authors to share their algorithms in an effort to make the world’s scientific code more open and reproducible. Learn more or sign up for free.
Editorials
- Editorial from the New Editor-in-Chief by Aidong Zhang (March/April 2016)
- Editorial from the Editor-in-Chief by Y. Xu (January/February 2015)
- Reviewer Appreciation Editorial by Y. Xu (July/August 2014)
- EIC Editorial by M.-F. Sagot (March/April 2011)
- EIC Editorial by M.-F. Sagot (January/February 2011)
Guest Editorials
- Guest Editorial for the 16th Asia Pacific Bioinformatics Conference (Jan/Feb 2019)
- Guest Editorial for Special Section on BIBM 2015
- Guest Editorial (July/Aug 2018)
- Guest Editorial for Special Section on the Sixth National Conference on Bioinformatics and System Biology of China (July/Aug 2018)
- Guest Editors’ Introduction to the Special Section on the 14th International Conference on Computational Methods in Systems Biology (CMSB 2016) (July/Aug 2018)
- Great Lakes Bioinformatics Conference (GLBIO) 2015 Special Section Editorial (July/Aug 2018)
- Selected Papers of the First International Conference on Algorithms for Computational Biology (AlCoB 2014) (March/April 2018)
- Guest Editorial for the 14th Asia Pacific Bioinformatics Conference (March/April 2018)
- Guest Editor's Introduction: Selected Papers from ACM-BCB 2014 (Sept/Oct 2017)
- Guest Editorial for Special Section on the 11th International Conference on Intelligent Computing (ICIC) (Sept/Oct 2017)
- Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications (May/June 2017)
- Special Section on Biological Data Mining and Its Applications in Healthcare (May/June 2017)
- Special Section on BIBM 2014 (March/April 2017)
- Special Section on ISBRA 2014 (March/April 2017)
- Special Section on Bio-Inspired Swarm Computing and Engineering (Jan/Feb 2017)
- Special Section on Big Data Computing and Processing in Computational Biology and Bioinformatics (Sept/Oct 2016)
- Introduction to the Special Section on Emerging Security Trends for Biomedical Computations, Devices, and Infrastructures (May/June 2016)
- Special Section on Semantic-Based Approaches for Analysis of Biological Data (March/April 2016)
- Special Section on the 10th International Conference on Intelligent Computing (ICIC) (Jan/Feb 2016)
- 13th Asia Pacific Bioinformatics Conference (Nov/Dec 2015)
- Knowledge Discovery Using Big Data in Biomedical Systems (July/August 2015)
- TCBB Special Section on the Brazilian Symposium on Bioinformatics 2013 (May/June 2015)
- Special Section on BIBM 2013 (March/April 2015)
- Selected Papers from ACM-BCB 2013 (Jan/Feb 2015)
- Special Section on BIOKDD2013 (Sept/Oct 2014)
- 12th Asia Pacific Bioinformatics Conference (July/August 2014)
- Pattern Recognition in Bioinformatics (May/June 2014)
- Special Section on Bioinformatics Research and Applications (May/June 2014)
- Bioinformatics and Computational Systems Biology (July/August 2012)
- High Performance Computational Systems Biology (May/June 2012)
- Special Section on Bioinformatics Research and Applications (July/August 2011)
- Special Focus on Bioinformatics and Systems Biology (March/April 2011)
- Special Section on Bioinformatics Research and Applications (Oct/Dec 2010)
Call for Papers
- Special Issue: Machine Learning for AI-Enhanced Healthcare and Medical Services: New Development and Promising Solution
Extended submission deadline: 31 Jan. 2019
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TCBB is a joint publication of the IEEE Computer Society and the Association for Computing Machinery.
Published in cooperation with: IEEE Control Systems Society and IEEE Engineering in Medicine and Biology Society
Indexed in MEDLINE®/PubMed® & ISI